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  5. Smo116036

Smo116036


Description : RNA processing.RNA modification.rRNA/tRNA methylation.DIM1A-type rRNA adenosine dimethylase


Gene families : OG0002989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo116036

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00244930 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
Adi_g050774 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056130 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04558 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14002 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63583 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14471 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18932 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037207 No alias rRNA adenosine dimethylase *(DIM1A) & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0144.g051552 No alias not classified & original description: CDS=153-1811 0.02 OrthoFinder output from all 47 species
Cba_g00996 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10228 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00851 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g02616 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018854001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.08 OrthoFinder output from all 47 species
LOC_Os07g32550.1 LOC_Os07g32550 rRNA adenosine dimethylase (DIM1B) 0.05 OrthoFinder output from all 47 species
Len_g08831 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22299 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05925 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00729 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01145 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020803 No alias rRNA adenosine dimethylase *(DIM1A) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g084730.3.1 Solyc02g084730 rRNA adenosine dimethylase (DIM1B) 0.05 OrthoFinder output from all 47 species
Tin_g05903 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g06535 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013790_P001 Zm00001e013790 rRNA adenosine dimethylase (DIM1A) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 24 249
No external refs found!