Smo115934


Description : RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI3 component


Gene families : OG0004899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004899_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo115934

Target Alias Description ECC score Gene Family Method Actions
AT1G76630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g13563 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.02 OrthoFinder output from all 47 species
Ala_g27528 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.05 OrthoFinder output from all 47 species
Als_g31818 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.04 OrthoFinder output from all 47 species
Ceric.1Z063400.1 Ceric.1Z063400 component *(SKI3) of SUPERKILLER regulation complex &... 0.04 OrthoFinder output from all 47 species
Cre12.g493550 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g31744 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g11179 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.04 OrthoFinder output from all 47 species
Dde_g43705 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
Len_g19173 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g09869 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
Mp1g26080.1 No alias component SKI3 of SUPERKILLER (SKI) regulation complex 0.07 OrthoFinder output from all 47 species
Nbi_g21863 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g09512 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.04 OrthoFinder output from all 47 species
Spa_g12824 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e002277_P001 Zm00001e002277 component SKI3 of SUPERKILLER (SKI) regulation complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!