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  5. Smo115313

Smo115313


Description : Protein biosynthesis.translation termination.eRF3 peptide release factor


Gene families : OG0004213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo115313

Target Alias Description ECC score Gene Family Method Actions
Ala_g10914 No alias translation termination factor *(eRF3) & original... 0.03 OrthoFinder output from all 47 species
Aop_g21103 No alias translation termination factor *(eRF3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene60249.t1 Aspi01Gene60249 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G096500.1 Ceric.02G096500 translation termination factor *(eRF3) & original... 0.03 OrthoFinder output from all 47 species
Cre06.g284750 No alias Protein biosynthesis.translation termination.eRF3... 0.05 OrthoFinder output from all 47 species
Dac_g17072 No alias translation termination factor *(eRF3) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06375 No alias translation termination factor *(eRF3) & original... 0.04 OrthoFinder output from all 47 species
Len_g35299 No alias translation termination factor *(eRF3) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g34425 No alias translation termination factor *(eRF3) & original... 0.03 OrthoFinder output from all 47 species
Mp1g00820.1 No alias eRF3 peptide release factor 0.03 OrthoFinder output from all 47 species
Ore_g31302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18384 No alias translation termination factor *(eRF3) & original... 0.02 OrthoFinder output from all 47 species
Spa_g00747 No alias translation termination factor *(eRF3) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e040640_P002 Zm00001e040640 eRF3 peptide release factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 21 233
No external refs found!