AMTR_s00066p00073650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.52

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCb-type E3 ligase


Gene families : OG_01_0000511 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000511_tree ,
OG_02_0001468 (LandPlants) Phylogenetic Tree(s): OG_02_0001468_tree ,
OG_03_0001396 (SeedPlants) Phylogenetic Tree(s): OG_03_0001396_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00073650
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Pp3c23_14640V3.1 No alias IBR domain-containing protein 0.02 Archaeplastida
Pp3c26_11830V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc11g008580.3.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Zm00001e003726_P005 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Zm00001e038664_P001 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
Pp3c23_14640V3.1 No alias IBR domain-containing protein 0.02 LandPlants
Solyc06g073340.3.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 LandPlants
Solyc11g008580.3.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 LandPlants
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants
Solyc06g073340.3.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 SeedPlants
Solyc11g008580.3.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002867 IBR_dom 284 330
IPR002867 IBR_dom 205 266
No external refs found!