Smo113076 (ATACA2, ACA2)


Aliases : ATACA2, ACA2

Description : Alpha carbonic anhydrase 2 OS=Arabidopsis thaliana


Gene families : OG0000437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo113076

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01171p00007730 ACA4, ATACA4,... Alpha carbonic anhydrase 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G52720 CAH1, ACA1, ATACA1 alpha carbonic anhydrase 1 0.02 OrthoFinder output from all 47 species
Cre09.g415700 ATACA7, ACA7 Bifunctional monodehydroascorbate reductase and carbonic... 0.02 OrthoFinder output from all 47 species
LOC_Os02g33030.1 CAH1, ACA1,... Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g03300.1 ACA4, ATACA4 Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g11360.1 CAH1, ACA1, ATACA1 ECC Pair graph </td> <td>Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis...</td> <td>0.05</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38416577" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1671050/73/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1558421" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1558421">Pp3c7_9400V3.1</a></td> <td>ATACA7, ACA7, Pp3c7_9400</td> <td>alpha carbonic anhydrase 7</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38416689" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1671050/73/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1558423" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1558423">Pp3c7_9420V3.1</a></td> <td>ATACA7, ACA7, Pp3c7_9420</td> <td>alpha carbonic anhydrase 7</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38416699" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1671050/73/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1558424" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1558424">Pp3c7_9490V3.1</a></td> <td>ATACA7, ACA7, Pp3c7_9490</td> <td>alpha carbonic anhydrase 7</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38416703" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1671050/73/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1558428" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1558428">Pp3c7_9520V3.1</a></td> <td>ATACA7, ACA7, Pp3c7_9520</td> <td>alpha carbonic anhydrase 7</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38416709" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1671050/73/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1558429" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1558429">Pp3c7_9540V3.1</a></td> <td>ATACA7, ACA7, Pp3c7_9540</td> <td>alpha carbonic anhydrase 7</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38416715" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1671050/73/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1558431" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1558431">Pp3c7_9610V3.1</a></td> <td>ATACA7, ACA7, Pp3c7_9610</td> <td>alpha carbonic anhydrase 7</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38416727" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1671050/73/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1558433" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1558433">Pp3c7_9630V3.1</a></td> <td>ATACA7, ACA7, Pp3c7_9630</td> <td>alpha carbonic anhydrase 7</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38416733" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1671050/73/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2891" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum." [EC:3.1.3.2]">GO:0003993</a></td> <td class="col-xs-6">acid phosphatase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4514" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y." [GOC:mah, ISBN:0198506732]">GO:0005975</a></td> <td class="col-xs-6">carbohydrate metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5387" data-toggle="tooltip" data-placement="top" title=""Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation)." [GOC:mah]">GO:0006950</a></td> <td class="col-xs-6">response to stress</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5410" data-toggle="tooltip" data-placement="top" title=""Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals." [GOC:jl, PMID:12115731]">GO:0006979</a></td> <td class="col-xs-6">response to oxidative stress</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/6130" data-toggle="tooltip" data-placement="top" title=""A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence." [GOC:pdt]">GO:0008150</a></td> <td class="col-xs-6">biological_process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10506" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of any ester bond." [GOC:jl]">GO:0016788</a></td> <td class="col-xs-6">hydrolase activity, acting on ester bonds</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10508" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate." [GOC:curators, GOC:pg]">GO:0016791</a></td> <td class="col-xs-6">phosphatase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/20476" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3." [GOC:jl]">GO:0042578</a></td> <td class="col-xs-6">phosphoric ester hydrolase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/26972" data-toggle="tooltip" data-placement="top" title=""Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism." [GOC:ai, GOC:bf]">GO:0050896</a></td> <td class="col-xs-6">response to stimulus</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/942">IPR001148</a></td> <td class="col-xs-5">CA_dom</td> <td class="col-xs-2">34</td> <td class="col-xs-2">233</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); 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