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  5. LOC_Os02g48060.1

LOC_Os02g48060.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g48060.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00066610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.02 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01037846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_29186g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_16620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.01 Archaeplastida
Smo118904 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g008030.3.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.07 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00046p00066610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.01 LandPlants
AMTR_s00046p00066610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 SeedPlants
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.01 SeedPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 SeedPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 SeedPlants
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.01 SeedPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 SeedPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.01 SeedPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 214 255
No external refs found!