LOC_Os02g48010.1


Description : CRWN nuclear lamina lamin-like protein


Gene families : OG_01_0002164 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002164_tree ,
OG_02_0001522 (LandPlants) Phylogenetic Tree(s): OG_02_0001522_tree ,
OG_03_0001206 (SeedPlants) Phylogenetic Tree(s): OG_03_0001206_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g48010.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00252300 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 Archaeplastida
AMTR_s00044p00204550 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.05 Archaeplastida
AT1G13220 LINC2 nuclear matrix constituent protein-related 0.03 Archaeplastida
AT1G67230 LINC1 little nuclei1 0.06 Archaeplastida
AT1G68790 LINC3 little nuclei3 0.11 Archaeplastida
AT5G65770 LINC4 little nuclei4 0.03 Archaeplastida
AT5G65780 ATBCAT-5 branched-chain amino acid aminotransferase 5 /... 0.08 Archaeplastida
GSVIVT01007428001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 Archaeplastida
GSVIVT01011972001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.04 Archaeplastida
GSVIVT01031076001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.07 Archaeplastida
Gb_03736 No alias CRWN nuclear lamina lamin-like protein 0.03 Archaeplastida
Mp3g21160.1 No alias CRWN nuclear lamina lamin-like protein 0.02 Archaeplastida
Pp3c2_34830V3.1 No alias little nuclei1 0.01 Archaeplastida
Solyc02g089800.3.1 No alias CRWN nuclear lamina lamin-like protein 0.11 Archaeplastida
Solyc02g091960.4.1 No alias CRWN nuclear lamina lamin-like protein 0.11 Archaeplastida
Solyc03g045050.4.1 No alias CRWN nuclear lamina lamin-like protein 0.09 Archaeplastida
Zm00001e019705_P002 No alias CRWN nuclear lamina lamin-like protein 0.07 Archaeplastida
Zm00001e023357_P001 No alias CRWN nuclear lamina lamin-like protein 0.16 Archaeplastida
AMTR_s00024p00252300 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 LandPlants
AMTR_s00044p00204550 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.04 LandPlants
AT1G13220 LINC2 nuclear matrix constituent protein-related 0.02 LandPlants
AT1G67230 LINC1 little nuclei1 0.05 LandPlants
AT1G68790 LINC3 little nuclei3 0.09 LandPlants
AT5G65770 LINC4 little nuclei4 0.03 LandPlants
AT5G65780 ATBCAT-5 branched-chain amino acid aminotransferase 5 /... 0.07 LandPlants
GSVIVT01007428001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.04 LandPlants
GSVIVT01011972001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.05 LandPlants
GSVIVT01031076001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.07 LandPlants
Gb_03736 No alias CRWN nuclear lamina lamin-like protein 0.03 LandPlants
Mp3g21160.1 No alias CRWN nuclear lamina lamin-like protein 0.02 LandPlants
Pp3c2_34830V3.1 No alias little nuclei1 0.01 LandPlants
Solyc02g089800.3.1 No alias CRWN nuclear lamina lamin-like protein 0.12 LandPlants
Solyc02g091960.4.1 No alias CRWN nuclear lamina lamin-like protein 0.1 LandPlants
Solyc03g045050.4.1 No alias CRWN nuclear lamina lamin-like protein 0.09 LandPlants
Zm00001e019705_P002 No alias CRWN nuclear lamina lamin-like protein 0.07 LandPlants
Zm00001e023357_P001 No alias CRWN nuclear lamina lamin-like protein 0.15 LandPlants
AMTR_s00024p00252300 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 SeedPlants
AMTR_s00044p00204550 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.04 SeedPlants
AT1G13220 LINC2 nuclear matrix constituent protein-related 0.02 SeedPlants
AT1G67230 LINC1 little nuclei1 0.05 SeedPlants
AT1G68790 LINC3 little nuclei3 0.08 SeedPlants
AT5G65770 LINC4 little nuclei4 0.03 SeedPlants
AT5G65780 ATBCAT-5 branched-chain amino acid aminotransferase 5 /... 0.07 SeedPlants
GSVIVT01007428001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 SeedPlants
GSVIVT01011972001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.04 SeedPlants
GSVIVT01031076001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.07 SeedPlants
Gb_03736 No alias CRWN nuclear lamina lamin-like protein 0.03 SeedPlants
Gb_20952 No alias CRWN nuclear lamina lamin-like protein 0.01 SeedPlants
Solyc02g089800.3.1 No alias CRWN nuclear lamina lamin-like protein 0.1 SeedPlants
Solyc02g091960.4.1 No alias CRWN nuclear lamina lamin-like protein 0.09 SeedPlants
Solyc03g045050.4.1 No alias CRWN nuclear lamina lamin-like protein 0.09 SeedPlants
Zm00001e019705_P002 No alias CRWN nuclear lamina lamin-like protein 0.07 SeedPlants
Zm00001e023357_P001 No alias CRWN nuclear lamina lamin-like protein 0.15 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!