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  5. Smo110000

Smo110000


Description : Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum


Gene families : OG0006458 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006458_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo110000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00107230 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT5G14260 No alias Rubisco methyltransferase family protein 0.03 OrthoFinder output from all 47 species
Adi_g105315 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.05 OrthoFinder output from all 47 species
Aev_g03895 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g08077 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Als_g10491 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.26G038400.1 Ceric.26G038400 protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06368 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Dde_g30677 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07683 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01001828001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os12g13460.1 LOC_Os12g13460 [Fructose-bisphosphate aldolase]-lysine... 0.03 OrthoFinder output from all 47 species
Lfl_g01985 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.09 OrthoFinder output from all 47 species
Mp8g11790.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g01165 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g10627 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g08544 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.05 OrthoFinder output from all 47 species
Pir_g10833 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g12195 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006185 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g25463 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Solyc02g068050.4.1 Solyc02g068050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g11014 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g06623 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e020362_P005 Zm00001e020362 [Fructose-bisphosphate aldolase]-lysine... 0.05 OrthoFinder output from all 47 species
Zm00001e027953_P005 Zm00001e027953 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 277 400
No external refs found!