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  5. Smo109987

Smo109987 (AGO1)


Aliases : AGO1

Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Smo109987

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00171480 AGO7, ZIP,... Protein argonaute 7 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Als_g09329 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35022.t1 AGO1, Aspi01Gene35022 siRNA-binding factor *(AGO2) of non-canonical RdDM... 0.02 OrthoFinder output from all 47 species
Dcu_g03128 PNH, AGO10, ZLL not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18181 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Gb_15866 AGO7, ZIP Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.08 OrthoFinder output from all 47 species
Msp_g13472 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Pnu_g23416 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012276_P001 AGO1, Zm00001e012276 Protein argonaute 12 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e029696_P001 AGO1, Zm00001e029696 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR032474 Argonaute_N 103 237
No external refs found!