LOC_Os02g47670.1


Description : U-box domain-containing protein 6 OS=Arabidopsis thaliana (sp|o48700|pub6_arath : 298.0)


Gene families : OG_01_0009435 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009435_tree ,
OG_02_0009464 (LandPlants) Phylogenetic Tree(s): OG_02_0009464_tree ,
OG_03_0004930 (SeedPlants) Phylogenetic Tree(s): OG_03_0004930_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g47670.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT4G36550 No alias ARM repeat superfamily protein 0.03 Archaeplastida
Solyc02g085140.4.1 No alias U-box domain-containing protein 5 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e015585_P002 No alias U-box domain-containing protein 6 OS=Arabidopsis... 0.04 Archaeplastida
AT4G36550 No alias ARM repeat superfamily protein 0.03 LandPlants
Solyc02g085140.4.1 No alias U-box domain-containing protein 5 OS=Arabidopsis... 0.03 LandPlants
Solyc03g034020.4.1 No alias U-box domain-containing protein 5 OS=Arabidopsis... 0.03 LandPlants
Zm00001e015585_P002 No alias U-box domain-containing protein 6 OS=Arabidopsis... 0.04 LandPlants
AT4G36550 No alias ARM repeat superfamily protein 0.02 SeedPlants
Solyc02g085140.4.1 No alias U-box domain-containing protein 5 OS=Arabidopsis... 0.01 SeedPlants
Zm00001e015585_P002 No alias U-box domain-containing protein 6 OS=Arabidopsis... 0.04 SeedPlants
Zm00001e036990_P001 No alias U-box domain-containing protein 6 OS=Arabidopsis... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 271 340
No external refs found!