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  5. Smo107782

Smo107782


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0008847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo107782
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00048060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01022967001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28120.1 LOC_Os09g28120 component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Len_g58454 No alias substrate(IPMS) adaptor of SCF E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g01458 No alias substrate(IPMS) adaptor of SCF E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc01g104230.4.1 Solyc01g104230 component FBX of SCF E3 ubiquitin ligase complex 0.05 OrthoFinder output from all 47 species
Zm00001e003778_P001 Zm00001e003778 component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Zm00001e009911_P001 Zm00001e009911 component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 40
No external refs found!