LOC_Os09g25550 (Os09g0423300)


Aliases : Os09g0423300

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0009262 (Gene family) Phylogenetic Tree(s): OG0009262_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os09g25550
Cluster HCCA cluster: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
GSVIVT01014050001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_187850g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d024409 GRMZM2G103250 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 753 782
IPR002885 Pentatricopeptide_repeat 300 329
IPR002885 Pentatricopeptide_repeat 648 674
IPR002885 Pentatricopeptide_repeat 374 398
IPR002885 Pentatricopeptide_repeat 613 642
IPR002885 Pentatricopeptide_repeat 787 817
IPR002885 Pentatricopeptide_repeat 543 566
IPR002885 Pentatricopeptide_repeat 719 747
IPR002885 Pentatricopeptide_repeat 579 604
IPR002885 Pentatricopeptide_repeat 477 503
IPR002885 Pentatricopeptide_repeat 889 936
IPR002885 Pentatricopeptide_repeat 823 864
IPR002885 Pentatricopeptide_repeat 401 448
No external refs found!