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Aliases : OTP82
Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo106861 | |
| Cluster | HCCA: Cluster_235 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00155620 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00031p00067070 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G18750 | DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g016095 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066083 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066672 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g076358 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g087163 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g094457 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32888 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g03960 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06798 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g10279 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21265 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24223 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g37274 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g01606 | OTP84 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g03408 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g11906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12955 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14349 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g22058 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28230 | SLO1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g30689 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g36470 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g39235 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g68455 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70660 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene16552.t1 | EMB2261, Aspi01Gene16552 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16559.t1 | EMB2261, Aspi01Gene16559 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene17592.t1 | Aspi01Gene17592 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene69211.t1 | Aspi01Gene69211 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000557 | OTP86 | not classified & original description: CDS=1-2739 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000996 | OTP84 | not classified & original description: CDS=1-3012 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0021.g015651 | No alias | not classified & original description: CDS=67-2907 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0072.g037011 | No alias | not classified & original description: CDS=202-3270 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0440.g070304 | CRR22 | not classified & original description: CDS=1-2568 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0515.g074972 | No alias | not classified & original description: CDS=1-2211 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0529.g075791 | No alias | protein involved in PS-I assembly *(PYG7) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g06922 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13627 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g19561 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20710 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20760 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75261 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G062600.1 | Ceric.01G062600 | not classified & original description: pacid=50592906... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G029900.1 | Ceric.10G029900 | not classified & original description: pacid=50612941... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.18G049300.1 | Ceric.18G049300 | ssDNA-binding protein *(OSB) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z079200.1 | CRR22, Ceric.1Z079200 | not classified & original description: pacid=50582193... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.31G069700.1 | CRR21, Ceric.31G069700 | not classified & original description: pacid=50574812... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g24752 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g31659 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g36039 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g42991 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08260 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g16666 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g16811 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17218 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g18940 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g21471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35622 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Dcu_g38639 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45850 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47860 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02941 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g05340 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g15911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16409 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g17215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21844 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22635 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23619 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g35725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g47958 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g47962 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000719001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01008965001 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009227001 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011333001 | SLO1 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033735001 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat-containing protein At5g03800... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g10800.1 | DOT4, LOC_Os01g10800 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g50280.1 | CRR22, LOC_Os02g50280 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g59264.1 | LOC_Os03g59264 | lectin chaperone (CRT) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18973 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g34160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g53456 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04754 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04947 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05718 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06733 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07338 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07397 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07727 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07802 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g32904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g35801 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g22928 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03782 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06275 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22679 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g32050 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g38645 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13006 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g13573 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g13600 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57972 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57980 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g61389 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63126 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63476 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63496 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63883 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g02794 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15729 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g23618 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g30637 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g32277 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06328 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g29087 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g31070 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g32073 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g48074 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g53384 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g54829 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g55034 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002209 | No alias | not classified & original description: CDS=347-2416 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003208 | No alias | monogalactosyldiacylglycerol lipase *(HIL1) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003613 | No alias | not classified & original description: CDS=279-3914 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004036 | OTP84 | not classified & original description: CDS=1-1773 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004577 | No alias | not classified & original description: CDS=1-1743 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005856 | No alias | not classified & original description: CDS=1-2292 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007167 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-3162 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007537 | No alias | not classified & original description: CDS=117-2237 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007726 | No alias | not classified & original description: CDS=1-3696 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008323 | No alias | not classified & original description: CDS=476-3628 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010017 | No alias | not classified & original description: CDS=111-3410 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012882 | No alias | not classified & original description: CDS=1-2733 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017091 | No alias | not classified & original description: CDS=1-3111 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017928 | No alias | not classified & original description: CDS=112-2919 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0093.g019001 | No alias | not classified & original description: CDS=1-2865 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019309 | No alias | not classified & original description: CDS=1-1605 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0117.g021130 | No alias | not classified & original description: CDS=1-2961 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0140.g022672 | No alias | not classified & original description: CDS=1-3558 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0144.g022971 | No alias | not classified & original description: CDS=343-1173 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0206.g025782 | No alias | not classified & original description: CDS=1-2394 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0207.g025786 | No alias | not classified & original description: CDS=42-3869 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0231.g026446 | No alias | not classified & original description: CDS=292-2991 | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g08403 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11238 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18488 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo105356 | No alias | Pentatricopeptide repeat-containing protein At3g63370,... | 0.01 | OrthoFinder output from all 47 species | |
| Smo442088 | CRR22 | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | OrthoFinder output from all 47 species | |
| Smo92231 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo93439 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g066920.1.1 | CRR28, Solyc11g066920 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01968 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15468 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25939 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g42473 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g49347 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26639 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g30138 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31398 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31801 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g44090 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g45519 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e034445_P001 | LPA66, Zm00001e034445 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 85 | 113 |
| No external refs found! |