LOC_Os09g25320 (Os09g0420800)


Aliases : Os09g0420800

Description : 29.5.11 protein.degradation.ubiquitin Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response. related to ubiquitin 1 (RUB1)


Gene families : OG_01_0000152 (Gene family) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os09g25320
Cluster HCCA cluster: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023461001 No alias 29.5.11.1 protein.degradation.ubiquitin.ubiquitin... 0.04 Gene family
Smo163447 PACid_15407474 29.5.11.1 protein.degradation.ubiquitin.ubiquitin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 79 150
No external refs found!