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Description : Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCq component
Gene families : OG0006405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo104804 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00112770 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g00780 | No alias | component *(LHCq) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g20424 | No alias | component *(LHCq) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene39605.t1 | Aspi01Gene39605 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G013700.1 | Ceric.10G013700 | component *(LHCq) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14212 | No alias | component *(LHCq) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04287 | No alias | component *(LHCq) of LHC-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01013450001 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g12540.1 | LOC_Os09g12540 | component LHCq of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02997 | No alias | component *(LHCq) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g00398 | No alias | component *(LHCq) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02034 | No alias | component *(LHCq) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e033739_P001 | Zm00001e033739 | component LHCq of LHC-II complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003333 | amino acid transmembrane transport | IEP | HCCA |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | HCCA |
| BP | GO:0006865 | amino acid transport | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
| BP | GO:0015849 | organic acid transport | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | HCCA |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 116 | 291 |
| No external refs found! |