Smo104800

Description : RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase

Gene families : OG0005712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005712_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo104800

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00103p00116510	evm_27.TU.AmTr_v1...	RNA processing.RNA modification.dihydrouridylation.tRNA...	0.02	OrthoFinder output from all 47 species
Adi_g084200	No alias	tRNA dihydrouridine synthase & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os04g20990.1	LOC_Os04g20990	tRNA dihydrouridine synthase	0.03	OrthoFinder output from all 47 species
Lfl_g08721	No alias	tRNA dihydrouridine synthase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e008546_P006	Zm00001e008546	tRNA dihydrouridine synthase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001269	DUS_fam	6	321

External Links

No external refs found!