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  5. Smo102435

Smo102435 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo102435

Target Alias Description ECC score Gene Family Method Actions
Adi_g005606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g30893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g28660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36669 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0012.g013040 No alias not classified & original description: CDS=1-1689 0.03 OrthoFinder output from all 47 species
Azfi_s0503.g073910 No alias not classified & original description: CDS=59-2179 0.02 OrthoFinder output from all 47 species
Cba_g31665 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.01 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.01 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.01 OrthoFinder output from all 47 species
Ceric.29G050000.1 Ceric.29G050000 ssDNA-binding protein *(OSB) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.30G017300.1 Ceric.30G017300 not classified & original description: pacid=50608904... 0.02 OrthoFinder output from all 47 species
Dac_g43925 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06831 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g25823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41493 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os05g37225.1 LOC_Os05g37225 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_5858185g0010 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.01 OrthoFinder output from all 47 species
Nbi_g26245 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57080 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29969 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008810 No alias not classified & original description: CDS=1-1683 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023499 No alias not classified & original description: CDS=1-1593 0.02 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g39240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53271 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g02798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 194 241
No external refs found!