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  5. Smo100512

Smo100512 (Y14)


Aliases : Y14

Description : RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component


Gene families : OG0003013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo100512

Target Alias Description ECC score Gene Family Method Actions
Adi_g008368 Y14 component *(Y14) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030862 Y14 component *(Y14) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021351.15 Y14 RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Len_g37404 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Pp3c7_3000V3.1 Y14, Pp3c7_3000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Ppi_g26340 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Spa_g44056 Y14 component *(Y14) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Tin_g04336 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 89 158
No external refs found!