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Aliases : ATRBP45C
Description : Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana
Gene families : OG0000531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000531_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo100454 | |
| Cluster | HCCA: Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G54900 | ATRBP45A, RBP45A | RNA-binding protein 45A | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g005260.3.1 | RBP45B,... | mRNA-binding regulatory factor (RBP45/47) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012505_P001 | ATRBP45A,... | mRNA-binding regulatory factor (RBP45/47) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003883 | CTP synthase activity | IEP | HCCA |
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0006772 | thiamine metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006862 | nucleotide transport | IEP | HCCA |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | HCCA |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | HCCA |
| BP | GO:0015748 | organophosphate ester transport | IEP | HCCA |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0034308 | primary alcohol metabolic process | IEP | HCCA |
| BP | GO:0034309 | primary alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 23 | 91 |
| No external refs found! |