LOC_Os12g43700.1 (LOC_Os12g43700)


Aliases : LOC_Os12g43700

Description : Pathogenesis-related protein PR-1 OS=Medicago truncatula (sp|q40374|pr1_medtr : 139.0)


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g43700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00199400 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.01 OrthoFinder output from all 47 species
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00200890 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00244110 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.06 OrthoFinder output from all 47 species
AT1G01310 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 OrthoFinder output from all 47 species
AT2G19970 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT4G25780 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 OrthoFinder output from all 47 species
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 OrthoFinder output from all 47 species
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
Adi_g015490 No alias CAPE precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g57903 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g278158 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g278160 No alias Pathogenesis-related protein 1A1 OS=Solanum lycopersicum 0.01 OrthoFinder output from all 47 species
Cre06.g278209 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g19657 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025577001 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.07 OrthoFinder output from all 47 species
GSVIVT01036993001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
LOC_Os05g51660.1 LOC_Os05g51660 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Mp3g03430.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g36477 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43596 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45456 No alias CAPE precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.04 OrthoFinder output from all 47 species
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
Solyc01g106600.2.1 Solyc01g106600 Basic form of pathogenesis-related protein 1... 0.04 OrthoFinder output from all 47 species
Solyc02g065470.1.1 Solyc02g065470 STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.02 OrthoFinder output from all 47 species
Solyc08g068990.2.1 Solyc08g068990 Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Spa_g40250 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016073_P001 Zm00001e016073 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
Zm00001e016075_P001 Zm00001e016075 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Zm00001e017920_P002 PRB1, ATPRB1,... Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e026690_P001 Zm00001e026690 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.1 OrthoFinder output from all 47 species
Zm00001e032607_P001 Zm00001e032607 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 289 406
No external refs found!