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  5. LOC_Os12g42820.1

LOC_Os12g42820.1 (DYAD, SWI1, LOC_Os12g42820)


Aliases : DYAD, SWI1, LOC_Os12g42820

Description : DYAD/SWI1 meiotic recombination regulating protein


Gene families : OG0003886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003886_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g42820.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00232360 DYAD, SWI1,... Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
Ala_g05314 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g00920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003609001 DYAD, SWI1 Cell cycle.mitosis and meiosis.meiotic... 0.03 OrthoFinder output from all 47 species
MA_57263g0010 DYAD, SWI1 DYAD/SWI1 meiotic recombination regulating protein 0.03 OrthoFinder output from all 47 species
Zm00001e003276_P001 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!