LOC_Os12g42280.1 (NCED3, SIS7, STO1,...)

Aliases : NCED3, SIS7, STO1, ATNCED3, LOC_Os12g42280

Description : neoxanthin cleavage protein

Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g42280.1

Target	Alias	Description	ECC score	Gene Family Method	Actions
Nbi_g20580	ATCCD1, CCD1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c12_22350V3.1	ATCCD1, CCD1,...	carotenoid cleavage dioxygenase 1	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEA	Interproscan
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	135	604

External Links

No external refs found!