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  5. LOC_Os12g41956.1

LOC_Os12g41956.1 (LOC_Os12g41956)


Aliases : LOC_Os12g41956

Description : hydroxyproline-O-galactosyltransferase (GALT). AGP hydroxyproline O-galactosyltransferase


Gene families : OG0000727 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g41956.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262720 GALT1,... Protein modification.N-linked glycosylation.complex... 0.03 OrthoFinder output from all 47 species
Adi_g117070 GALT1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17641 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046091 GALT1 not classified & original description: CDS=565-2319 0.02 OrthoFinder output from all 47 species
Azfi_s0123.g048384 No alias not classified & original description: CDS=1-2025 0.04 OrthoFinder output from all 47 species
Cba_g23277 GALT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08578 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Dde_g26234 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Ehy_g15646 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
LOC_Os07g09670.1 LOC_Os07g09670 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.03 OrthoFinder output from all 47 species
Pir_g16236 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Pnu_g09521 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Ppi_g10307 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.01 OrthoFinder output from all 47 species
Smo183099 GALT1 Beta-1,3-galactosyltransferase GALT1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g070400.3.1 Solyc02g070400 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.02 OrthoFinder output from all 47 species
Solyc03g113520.3.1 Solyc03g113520 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.03 OrthoFinder output from all 47 species
Solyc05g007930.3.1 GALT1, Solyc05g007930 beta-1,3-galactosyltransferase 0.05 OrthoFinder output from all 47 species
Zm00001e006047_P001 Zm00001e006047 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.04 OrthoFinder output from all 47 species
Zm00001e011406_P001 Zm00001e011406 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.06 OrthoFinder output from all 47 species
Zm00001e018130_P001 Zm00001e018130 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.03 OrthoFinder output from all 47 species
Zm00001e030866_P001 GALT1, Zm00001e030866 beta-1,3-galactosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 426 607
IPR001079 Galectin_CRD 173 378
No external refs found!