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  5. LOC_Os12g41910.2

LOC_Os12g41910.2 (LOC_Os12g41910)


Aliases : LOC_Os12g41910

Description : BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana (sp|q9s9q9|y1044_arath : 739.0)


Gene families : OG0000772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g41910.2
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT5G03250 No alias Phototropic-responsive NPH3 family protein 0.05 OrthoFinder output from all 47 species
Ala_g30009 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Als_g09480 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17557.t1 Aspi01Gene17557 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Cba_g24771 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cba_g36901 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Ceric.07G064900.1 Ceric.07G064900 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Ceric.21G036600.1 Ceric.21G036600 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Ceric.22G063400.1 Ceric.22G063400 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Ceric.31G041900.1 Ceric.31G041900 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Dac_g01721 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Dcu_g14448 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Dde_g51048 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Ehy_g03948 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01003773001 No alias BTB/POZ domain-containing protein At5g66560... 0.02 OrthoFinder output from all 47 species
GSVIVT01021598001 No alias BTB/POZ domain-containing protein At1g30440... 0.04 OrthoFinder output from all 47 species
GSVIVT01031416001 No alias BTB/POZ domain-containing protein At3g44820... 0.03 OrthoFinder output from all 47 species
Gb_16497 No alias BTB/POZ domain-containing protein At1g30440... 0.03 OrthoFinder output from all 47 species
Gb_31331 No alias BTB/POZ domain-containing protein At1g30440... 0.02 OrthoFinder output from all 47 species
LOC_Os03g55830.1 LOC_Os03g55830 BTB/POZ domain-containing protein At5g66560... 0.04 OrthoFinder output from all 47 species
Len_g26527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17490 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Lfl_g29709 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
MA_38486g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.05 OrthoFinder output from all 47 species
MA_45208g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.04 OrthoFinder output from all 47 species
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.03 OrthoFinder output from all 47 species
Msp_g13112 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Nbi_g08002 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Pnu_g10110 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Pnu_g33996 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009652 No alias not classified & original description: CDS=136-2424 0.05 OrthoFinder output from all 47 species
Sam_g17668 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Sam_g19593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g021640.3.1 Solyc02g021640 BTB/POZ domain-containing protein At1g30440... 0.06 OrthoFinder output from all 47 species
Solyc02g090070.3.1 Solyc02g090070 BTB/POZ domain-containing protein At5g66560... 0.03 OrthoFinder output from all 47 species
Spa_g05885 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Spa_g39042 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04717 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquiTin... 0.03 OrthoFinder output from all 47 species
Zm00001e005028_P001 Zm00001e005028 BTB/POZ domain-containing protein At1g30440... 0.04 OrthoFinder output from all 47 species
Zm00001e011959_P001 Zm00001e011959 BTB/POZ domain-containing protein At5g66560... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 211 469
IPR000210 BTB/POZ_dom 27 113
No external refs found!