LOC_Os12g41890.1 (AAT1, CAT1, LOC_Os12g41890)

Aliases : AAT1, CAT1, LOC_Os12g41890

Description : cationic amino acid transporter (CAT)

Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g41890.1
Cluster	HCCA: Cluster_479

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00114p00137590	CAT7,...	Solute transport.carrier-mediated transport.APC...	0.03	OrthoFinder output from all 47 species
GSVIVT01003684001	ATCAT6, CAT6	Solute transport.carrier-mediated transport.APC...	0.04	OrthoFinder output from all 47 species
GSVIVT01005552001	ATCAT6, CAT6	Cationic amino acid transporter 6, chloroplastic...	0.05	OrthoFinder output from all 47 species
MA_9363g0010	AAT1, CAT1	cationic amino acid transporter (CAT)	0.07	OrthoFinder output from all 47 species
Solyc02g081850.4.1	CAT5, Solyc02g081850	cationic amino acid transporter (CAT)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002293	AA/rel_permease1	78	454
IPR029485	CAT_C	520	570

External Links

No external refs found!