Aliases : PIL5, PIF1, LOC_Os12g41650
Description : transcription factor (bHLH). PIF red/far-red light perception transcriptional regulator
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00024p00250370 | RHD6,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00025p00087300 | LRL2,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00045p00141060 | PIF3, POC1,... | External stimuli response.light.red/far red light.PIF... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00106p00127480 | UNE10,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00110p00030150 | UNE10,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.06 | OrthoFinder output from all 47 species | |
AT2G42280 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT2G43010 | SRL2, PIF4, AtPIF4 | phytochrome interacting factor 4 | 0.03 | OrthoFinder output from all 47 species | |
AT3G21330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G59060 | PIL6, PIF5 | phytochrome interacting factor 3-like 6 | 0.05 | OrthoFinder output from all 47 species | |
AT4G00050 | UNE10 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT5G50915 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G61270 | PIF7 | phytochrome-interacting factor7 | 0.05 | OrthoFinder output from all 47 species | |
Adi_g036691 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g10597 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g08014 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g33578 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g18590 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09856 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g17948 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g29816 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene28112.t1 | PIF3, POC1,... | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene54818.t2 | RSL2, Aspi01Gene54818 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene66676.t2 | Aspi01Gene66676 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0197.g057308 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0276.g061452 | No alias | bHLH-type transcription factor & original description: CDS=1-1854 | 0.04 | OrthoFinder output from all 47 species | |
Cba_g34527 | HEC2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G092700.1 | Ceric.04G092700 | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.28G002800.1 | Ceric.28G002800 | regulatory protein (CIB) of blue light perception &... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.31G051300.1 | LRL3, Ceric.31G051300 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g39719 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g12124 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01011873001 | No alias | External stimuli response.light.UV-A/blue... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01018094001 | UNE12 | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01020814001 | SRL2, PIF4, AtPIF4 | External stimuli response.light.red/far red light.PIF... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01023783001 | CIB1 | External stimuli response.light.UV-A/blue... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01028516001 | PIL5, PIF1 | External stimuli response.light.red/far red light.PIF... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g04740.2 | PIF3, POC1,... | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
Len_g13668 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g29979 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp5g18910.1 | HEC1 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
Mp6g21470.1 | RSL2 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
Mpzg01410.1 | LRL3 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g35112 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ore_g12865 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g19546 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g19998 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g43162 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g26288 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g45935 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g09963 | HEC1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pp3c3_8460V3.1 | RSL2, Pp3c3_8460 | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.01 | OrthoFinder output from all 47 species | |
Sam_g20059 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
Smo405220 | HEC1 | RNA biosynthesis.transcriptional activation.bHLH... | 0.06 | OrthoFinder output from all 47 species | |
Solyc03g097820.2.1 | Solyc03g097820 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g065820.4.1 | UNE12, Solyc09g065820 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g23827 | HEC1 | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g57305 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g38881 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005046_P003 | PIL5, PIF1,... | transcription factor (bHLH). PIF red/far-red light... | 0.09 | OrthoFinder output from all 47 species | |
Zm00001e010138_P002 | Zm00001e010138 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e020012_P001 | Zm00001e020012 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e020477_P001 | Zm00001e020477 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e023698_P001 | LRL3, Zm00001e023698 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011598 | bHLH_dom | 273 | 319 |
No external refs found! |