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LOC_Os12g40560.1 (FLK, LOC_Os12g40560)


Aliases : FLK, LOC_Os12g40560

Description : Flowering locus K homology domain OS=Arabidopsis thaliana (sp|q9sr13|flk_arath : 325.0)


Gene families : OG0001316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g40560.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00263460 FLK,... Flowering locus K homology domain OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aop_g00606 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Azfi_s0072.g036910 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Dcu_g05441 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Dcu_g06211 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
MA_10431753g0010 FLK Flowering locus K homology domain OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_75925g0010 FLK Flowering locus K homology domain OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Pnu_g03125 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Solyc01g097010.3.1 FLK, Solyc01g097010 Flowering locus K homology domain OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e002374_P003 PEP, Zm00001e002374 RNA-binding KH domain-containing protein PEPPER... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 209 274
IPR004088 KH_dom_type_1 117 167
IPR004088 KH_dom_type_1 391 452
No external refs found!