LOC_Os12g40490.1 (LOC_Os12g40490)


Aliases : LOC_Os12g40490

Description : ubiquitin receptor regulatory protein (DA1)


Gene families : OG0000918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g40490.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00161610 evm_27.TU.AmTr_v1... Protein DA1-related 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g105104 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08897 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13429 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22213 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g69358 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G042400.1 Ceric.11G042400 ubiquitin-dependent protease *(DA1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g03275 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009636001 DA1 Protein DA1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019041001 No alias Protein DA1-related 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_09692 No alias ubiquitin receptor regulatory protein (DA1) 0.05 OrthoFinder output from all 47 species
Gb_39736 DAR2 Protein DA1-related 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10429612g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_882912g0010 No alias ubiquitin receptor regulatory protein (DA1) 0.03 OrthoFinder output from all 47 species
Pir_g40645 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09075 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16130 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Smo143378 No alias Protein DA1-related 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g079910.3.1 DAR2, Solyc03g079910 ubiquitin receptor regulatory protein (DA1) 0.05 OrthoFinder output from all 47 species
Solyc04g079840.4.1 DA1, Solyc04g079840 ubiquitin receptor regulatory protein (DA1) 0.05 OrthoFinder output from all 47 species
Solyc05g052910.4.1 DAR2, Solyc05g052910 ubiquitin receptor regulatory protein (DA1) 0.09 OrthoFinder output from all 47 species
Spa_g15399 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23361 No alias ubiquiTin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003135_P001 Zm00001e003135 ubiquitin receptor regulatory protein (DA1) 0.02 OrthoFinder output from all 47 species
Zm00001e005086_P004 Zm00001e005086 ubiquitin receptor regulatory protein (DA1) 0.05 OrthoFinder output from all 47 species
Zm00001e024222_P001 DAR2, Zm00001e024222 ubiquitin receptor regulatory protein (DA1) 0.03 OrthoFinder output from all 47 species
Zm00001e038503_P001 DAR2, Zm00001e038503 ubiquitin receptor regulatory protein (DA1) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR022087 DA1-like_dom 268 481
IPR001781 Znf_LIM 119 173
No external refs found!