1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g38870.2

LOC_Os12g38870.2 (LOC_Os12g38870)


Aliases : LOC_Os12g38870

Description : no hits & (original description: none)


Gene families : OG0001399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001399_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g38870.2
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Ala_g15244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015477 No alias not classified & original description: CDS=1-2901 0.03 OrthoFinder output from all 47 species
Solyc02g088480.3.1 Solyc02g088480 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008581 DUF863_pln 130 332
IPR008581 DUF863_pln 524 776
No external refs found!