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  5. LOC_Os12g38730.1

LOC_Os12g38730.1 (LOC_Os12g38730)


Aliases : LOC_Os12g38730

Description : no hits & (original description: none)


Gene families : OG0002245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g38730.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00022230 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT3G09730 No alias unknown protein; Has 1171 Blast hits to 1097 proteins in... 0.03 OrthoFinder output from all 47 species
Adi_g097614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02596 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.03 OrthoFinder output from all 47 species
Aev_g18821 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.03 OrthoFinder output from all 47 species
Ala_g12947 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.05 OrthoFinder output from all 47 species
Als_g33655 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.03 OrthoFinder output from all 47 species
Aop_g09288 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.08 OrthoFinder output from all 47 species
Cba_g06592 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.04 OrthoFinder output from all 47 species
Dac_g01782 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.04 OrthoFinder output from all 47 species
Dcu_g05829 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.04 OrthoFinder output from all 47 species
Len_g57609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10445 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.03 OrthoFinder output from all 47 species
Sam_g11240 No alias polarity scaffold protein (POLAR) of asymmetric cell... 0.03 OrthoFinder output from all 47 species
Smo402072 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006359 regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!