1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g38310.1

LOC_Os12g38310.1 (LOC_Os12g38310)


Aliases : LOC_Os12g38310

Description : component Tim9 of inner mitochondrion membrane TIM22 insertion system


Gene families : OG0006268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006268_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g38310.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT3G46560 TIM9, emb2474 Tim10/DDP family zinc finger protein 0.23 OrthoFinder output from all 47 species
Azfi_s0065.g035925 No alias component *(Tim9) of inner mitochondrion membrane TIM22... 0.04 OrthoFinder output from all 47 species
Ceric.12G010600.1 TIM9, emb2474,... component *(Tim9) of inner mitochondrion membrane TIM22... 0.12 OrthoFinder output from all 47 species
GSVIVT01024961001 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.04 OrthoFinder output from all 47 species
GSVIVT01034172001 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.04 OrthoFinder output from all 47 species
Len_g53476 TIM9, emb2474 component *(Tim9) of inner mitochondrion membrane TIM22... 0.04 OrthoFinder output from all 47 species
Lfl_g36802 TIM9, emb2474 component *(Tim9) of inner mitochondrion membrane TIM22... 0.08 OrthoFinder output from all 47 species
Mp4g24090.1 No alias component Tim9 of inner mitochondrion membrane TIM22... 0.05 OrthoFinder output from all 47 species
Pir_g56831 TIM9, emb2474 component *(Tim9) of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
Pp3c24_15930V3.1 Pp3c24_15930 Tim10/DDP family zinc finger protein 0.13 OrthoFinder output from all 47 species
Ppi_g22495 TIM9, emb2474 component *(Tim9) of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
Sam_g35144 No alias component *(Tim9) of inner mitochondrion membrane TIM22... 0.13 OrthoFinder output from all 47 species
Smo74249 TIM9, emb2474 Protein translocation.mitochondrion.inner mitochondrion... 0.06 OrthoFinder output from all 47 species
Solyc10g086510.2.1 TIM9, emb2474,... component Tim9 of inner mitochondrion membrane TIM22... 0.05 OrthoFinder output from all 47 species
Tin_g41329 TIM9, emb2474 component *(Tim9) of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004217 Tim10-like 24 84
No external refs found!