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  5. LOC_Os12g38010.1

LOC_Os12g38010.1 (LOC_Os12g38010)


Aliases : LOC_Os12g38010

Description : no hits & (original description: none)


Gene families : OG0009175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g38010.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024967001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01024969001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01034174001 No alias Metallothionein-like protein type 2 OS=Actinidia deliciosa 0.03 OrthoFinder output from all 47 species
LOC_Os11g47809.1 LOC_Os11g47809 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g38051.1 LOC_Os12g38051 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005163 No alias not classified & original description: CDS=235-456 0.03 OrthoFinder output from all 47 species
Solyc06g005465.1.1 Solyc06g005465 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000347 Metalthion_15p 2 78
No external refs found!