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  5. LOC_Os12g37970.1

LOC_Os12g37970.1 (ATMYB48-1, MYB48,...)


Aliases : ATMYB48-1, MYB48, ATMYB48-2, ATMYB48, ATMYB48-3, LOC_Os12g37970

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g37970.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 BOS1, AtMYB108,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00201260 MYB36, AtMYB36,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00133p00071910 ATMYB35, TDF1,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 OrthoFinder output from all 47 species
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.03 OrthoFinder output from all 47 species
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.04 OrthoFinder output from all 47 species
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 OrthoFinder output from all 47 species
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.03 OrthoFinder output from all 47 species
AT1G74430 ATMYBCP66, MYB95, ATMYB95 myb domain protein 95 0.03 OrthoFinder output from all 47 species
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.02 OrthoFinder output from all 47 species
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 OrthoFinder output from all 47 species
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.07 OrthoFinder output from all 47 species
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.04 OrthoFinder output from all 47 species
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 OrthoFinder output from all 47 species
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.04 OrthoFinder output from all 47 species
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 OrthoFinder output from all 47 species
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 OrthoFinder output from all 47 species
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 OrthoFinder output from all 47 species
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 OrthoFinder output from all 47 species
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.03 OrthoFinder output from all 47 species
Adi_g012798 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Als_g18761 AtMYB20, MYB20 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aob_g33392 MYB32, AtMYB32 MYB class-R2R3 subgroup-4 transcription factor &... 0.06 OrthoFinder output from all 47 species
Aop_g65134 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06610.t1 AtMYB17, MYB17,... MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35091.t1 AtMYB50, MYB50,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43029.t1 ATMYB61, MYB61,... MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene43617.t1 AtMYB20, MYB20,... MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56182.t1 AtMYB20, MYB20,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009119 AtMYB50, MYB50 not classified & original description: CDS=159-1784 0.02 OrthoFinder output from all 47 species
Cba_g76438 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10687 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g34527 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26842 AtMYB50, MYB50 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40776 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Dcu_g42771 MYB103,... transcriptional regulator *(MS188) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47339 ATMYB4, MYB4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04249 MYB7, ATY49, ATMYB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22700 AtMYB97, MYB97 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01004464001 MYB84, RAX3, ATMYB84 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01011417001 MYB30, ATMYB30 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01012447001 MYB33, ATMYB33 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01018234001 DUO1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01025034001 ATMYB59-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01030708001 AtMYB20, MYB20 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01032564001 ATMYB35, TDF1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01037362001 MYB33, ATMYB33 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
Gb_08383 AtMYB107, MYB107 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Gb_15606 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_20014 AtMYB74, MYB74 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_23693 AtMYB53, MYB53 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_25814 ATMYB61, MYB61 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Gb_33678 MYB103, AtMYB103 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Gb_34086 ATMYB5, MYB5 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g09590.1 ATMYB38, MYB38,... transcription factor (MYB) 0.08 OrthoFinder output from all 47 species
LOC_Os01g50110.1 ATMYB5, MYB5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g27090.1 MYB9, AtMYB9,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g04820.1 ATMYB61, MYB61,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os07g44090.3 AtMYB50, MYB50,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os08g05520.1 MYB103,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43550.1 MYB7, ATY49,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
LOC_Os09g26170.1 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Len_g15403 ATMYB4, MYB4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57346 MYB3, ATMYB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432903g0010 ATMYB4, MYB4 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_322432g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_323706g0010 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_53373g0010 ATMYB5, MYB5 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_81763g0010 ATMYB4, MYB4 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_8206949g0010 AtMYB107, MYB107 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_9818613g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp3g23170.1 MYB103,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Nbi_g27829 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Nbi_g30785 MYB3, ATMYB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17491 DUO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25108 MYB103, AtMYB103 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43977 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g16020 ATMYB61, MYB61 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16421 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46009 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.04 OrthoFinder output from all 47 species
Pnu_g17554 MYB86, ATMYB86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06374 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ppi_g14641 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010734 MYB9, AtMYB9 not classified & original description: CDS=1-1800 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014109 ATMIXTA, MYB16, ATMYB16 not classified & original description: CDS=359-1453 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018494 AtMYB50, MYB50 not classified & original description: CDS=626-958 0.03 OrthoFinder output from all 47 species
Sam_g03372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g087130.4.1 AtMYB83, MYB83,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc02g067340.4.1 ATMYB94,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc02g088190.4.1 MYB106, NOK,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc06g005330.3.1 ATMYB48-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc06g053610.3.1 ATMYB15, ATY19,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc06g065100.3.1 ATMYB4, MYB4,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc10g044680.2.1 ATMYB61, MYB61,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc10g086290.3.1 AtMYB113,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc11g069030.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc12g049300.2.1 MYB3, ATMYB3,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Spa_g10163 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Spa_g38047 MYB106, NOK, AtMYB106 MYB class-R2R3 subgroup-8 transcription factor &... 0.05 OrthoFinder output from all 47 species
Spa_g52124 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06928 AtMYB17, MYB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001399_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e002893_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e002919_P001 ATMYB59-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e004114_P001 MYBCOV1, MYB96,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e004164_P002 AtMYB20, MYB20,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e016072_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e017036_P001 BW62B, BW62C,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e017470_P001 AtMYB112,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e018186_P001 ATMYB59-1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e019501_P001 ATMYB65, MYB65,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Zm00001e020371_P001 ATMYB21, MYB21,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e020754_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e020963_P001 ATMYB59-1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e026464_P001 Zm00001e026464 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e029600_P001 ATMYB59-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e029601_P001 ATMYB59-1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e030293_P001 MYB33, ATMYB33,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e035025_P001 ATY53, ATMYB67,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e035993_P001 MYB7, ATY49,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e038356_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e040334_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 10 57
IPR001005 SANT/Myb 63 107
No external refs found!