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LOC_Os12g35580.1 (LOC_Os12g35580)


Aliases : LOC_Os12g35580

Description : riboflavin synthase (RibC)


Gene families : OG0004364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g35580.1

Target Alias Description ECC score Gene Family Method Actions
Als_g12585 No alias riboflavin synthase *(RibC) & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g296600 No alias Coenzyme metabolism.FMN/FAD biosynthesis.riboflavin... 0.03 OrthoFinder output from all 47 species
Len_g47199 No alias riboflavin synthase *(RibC) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08281 No alias riboflavin synthase *(RibC) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g054190.4.1 Solyc07g054190 riboflavin synthase (RibC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR026017 Lumazine-bd_dom 85 180
IPR026017 Lumazine-bd_dom 193 279
No external refs found!