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  5. LOC_Os12g34850.1

LOC_Os12g34850.1 (VIL1, VRN5, LOC_Os12g34850)


Aliases : VIL1, VRN5, LOC_Os12g34850

Description : PRC2-VRN-interacting PHD protein (VIN3|VRN5)


Gene families : OG0001143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g34850.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g084115 VIN3 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.01 OrthoFinder output from all 47 species
Aev_g19531 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.01 OrthoFinder output from all 47 species
Aob_g11985 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
Aob_g11986 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Cba_g13613 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Cba_g20507 VIN3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76179 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.30G057100.1 VEL1, VIL2,... PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Dcu_g22153 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
LOC_Os08g12430.1 VEL1, VIL2,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.03 OrthoFinder output from all 47 species
MA_103156g0010 VEL1, VIL2 PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.03 OrthoFinder output from all 47 species
Ore_g17632 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
Zm00001e013677_P002 VEL1, VIL2,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003961 FN3_dom 343 424
IPR032881 Oberon_PHD 141 259
No external refs found!