LOC_Os09g23560 (Os09g0400400)


Aliases : Os09g0400400

Description : 16.2.1.10 secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD elicitor-activated gene 3-1 (ELI3-1)


Gene families : OG_01_0000137 (Gene family) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os09g23560
Cluster HCCA cluster: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT1G72680 CAD1, ATCAD1 cinnamyl-alcohol dehydrogenase 0.05 Gene family
AT3G19450 ATCAD4, CAD-C, CAD, CAD4 GroES-like zinc-binding alcohol dehydrogenase family protein 0.02 Gene family
AT4G34230 CAD5, ATCAD5, CAD-5 cinnamyl alcohol dehydrogenase 5 0.04 Gene family
GSVIVT01002106001 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
GSVIVT01006310001 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
GSVIVT01009972001 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
GSVIVT01013448001 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
GSVIVT01021654001 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
LOC_Os04g15920 Os04g0229100 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
LOC_Os04g52280 Os04g0612700 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
LOC_Os09g23550 Os09g0400300 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
LOC_Os10g29470 Os10g0430200 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.05 Gene family
MA_10432110g0010 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
MA_104401g0010 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
MA_423264g0010 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
MA_9417966g0010 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Smo444096 PACid_15413795 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Solyc11g011330.2.1 Solyc11g011330.2 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
Solyc11g011340.2.1 Solyc11g011340.2 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.05 Gene family
Zm00001d020400 No alias 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
Zm00001d045043 GRMZM2G090980 16.2.1.10 secondary metabolism.phenylpropanoids.lignin... 0.08 Gene family

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013154 ADH_N 33 147
IPR013149 ADH_C 189 310
No external refs found!