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  5. LOC_Os12g32820.1

LOC_Os12g32820.1 (ATPDR5, PDR5, LOC_Os12g32820)


Aliases : ATPDR5, PDR5, LOC_Os12g32820

Description : subfamily ABCG transporter


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g32820.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00120860 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Adi_g034248 PDR4, ATPDR4 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22771 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57721 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70240 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66181.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011362 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=327-4706 0.04 OrthoFinder output from all 47 species
Cba_g10025 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g15342 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27199 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76298 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07439 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39411 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10607 PEN3, ABCG36,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03409 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10485 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41745 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44046 ATPDR7, PDR7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05743 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14948 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42263 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c18_21520V3.1 PDR1, ATPDR1,... ABC-2 and Plant PDR ABC-type transporter family protein 0.01 OrthoFinder output from all 47 species
Ppi_g08470 PDR11, ATPDR11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09231 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15527 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57627 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g62384 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63364 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002637 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=213-4610 0.02 OrthoFinder output from all 47 species
Sam_g29979 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo118688 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo82705 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo99541 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.09 OrthoFinder output from all 47 species
Tin_g09989 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g15245 ABCG40, PDR12,... not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013581 PDR_assoc 478 534
IPR013525 ABC_2_trans 263 473
IPR003439 ABC_transporter-like_ATP-bd 607 692
No external refs found!