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  5. LOC_Os12g32690.1

LOC_Os12g32690.1 (LOC_Os12g32690)


Aliases : LOC_Os12g32690

Description : no hits & (original description: none)


Gene families : OG0000992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000992_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g32690.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cba_g22507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g43980.1 LOC_Os01g43980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g16300.1 LOC_Os02g16300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g24090.1 LOC_Os02g24090 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g47340.1 LOC_Os02g47340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g11850.1 LOC_Os04g11850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g01770.1 LOC_Os10g01770 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g22130.1 LOC_Os10g22130 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g24940.1 LOC_Os10g24940 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g44830.1 LOC_Os11g44830 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g23030.1 LOC_Os12g23030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g35400.1 LOC_Os12g35400 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g42791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_18610V3.1 Pp3c17_18610 PIF1 helicase 0.02 OrthoFinder output from all 47 species
Pp3c1_35290V3.1 Pp3c1_35290 No annotation 0.01 OrthoFinder output from all 47 species
Pp3s62_90V3.1 Pp3s62_90 PIF1 helicase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 446 529
IPR010285 DNA_helicase_pif1-like 530 599
No external refs found!