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  5. LOC_Os12g31850.1

LOC_Os12g31850.1 (UPS1, ATUPS1, LOC_Os12g31850)


Aliases : UPS1, ATUPS1, LOC_Os12g31850

Description : nucleobase cation transporter (UPS)


Gene families : OG0003059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g31850.1
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT1G26440 UPS5, ATUPS5 ureide permease 5 0.03 OrthoFinder output from all 47 species
AT2G03600 ATUPS3, UPS3 ureide permease 3 0.02 OrthoFinder output from all 47 species
Aspi01Gene51713.t1 UPS1, ATUPS1,... nucleobase cation transporter *(UPS) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g40893 UPS5, ATUPS5 nucleobase cation transporter *(UPS) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G033300.1 UPS1, ATUPS1,... nucleobase cation transporter *(UPS) & original... 0.03 OrthoFinder output from all 47 species
Dac_g12153 UPS1, ATUPS1 nucleobase cation transporter *(UPS) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09547 UPS1, ATUPS1 nucleobase cation transporter *(UPS) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04005 UPS1, ATUPS1 nucleobase cation transporter (UPS) 0.03 OrthoFinder output from all 47 species
Ppi_g54857 UPS1, ATUPS1 nucleobase cation transporter *(UPS) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029298_P002 UPS1, ATUPS1,... nucleobase cation transporter (UPS) 0.03 OrthoFinder output from all 47 species
Zm00001e039592_P002 UPS1, ATUPS1,... nucleobase cation transporter (UPS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0071705 nitrogen compound transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR009834 Ureide_permease 76 438
No external refs found!