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  5. LOC_Os12g29500.1

LOC_Os12g29500.1 (LOC_Os12g29500)


Aliases : LOC_Os12g29500

Description : no hits & (original description: none)


Gene families : OG0001219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g29500.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT5G13250 No alias RING finger protein 0.06 OrthoFinder output from all 47 species
Aspi01Gene43873.t1 DRIP2, Aspi01Gene43873 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010751 No alias not classified & original description: CDS=617-2017 0.04 OrthoFinder output from all 47 species
GSVIVT01000970001 No alias Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc01g009720.2.1 Solyc01g009720 Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc09g083310.3.1 Solyc09g083310 E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e008317_P002 Zm00001e008317 Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Zm00001e017797_P001 Zm00001e017797 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!