LOC_Os12g28770.1 (LOC_Os12g28770)


Aliases : LOC_Os12g28770

Description : no hits & (original description: none)


Gene families : OG0002521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002521_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g28770.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00152060 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT5G13140 No alias Pollen Ole e 1 allergen and extensin family protein 0.04 OrthoFinder output from all 47 species
AT5G15780 No alias Pollen Ole e 1 allergen and extensin family protein 0.08 OrthoFinder output from all 47 species
Als_g04754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14804.t1 Aspi01Gene14804 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40014.t1 Aspi01Gene40014 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40015.t1 Aspi01Gene40015 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40016.t1 Aspi01Gene40016 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59833.t1 Aspi01Gene59833 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G064600.1 Ceric.22G064600 not classified & original description: pacid=50614576... 0.03 OrthoFinder output from all 47 species
Dcu_g14300 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18689 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005138001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01036543001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_23891 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_35750 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_35755 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_35756 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g38037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428798g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429716g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_119720g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18633g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_22529g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_53450g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_68149g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_704466g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_90712g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_945449g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g29365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38396 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo405039 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc03g046580.1.1 Solyc03g046580 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g012170.1.1 Solyc11g012170 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g012705.2.1 Solyc11g012705 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g49949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005021_P001 Zm00001e005021 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!