LOC_Os09g23200 (Os09g0395300)


Aliases : Os09g0395300

Description : 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os09g23200
Cluster HCCA cluster: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Gene family
MA_10251997g0010 No alias No description available 0.02 Gene family
MA_120020g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_937875g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc04g079600.3.1 Solyc04g079600.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Solyc06g066340.3.1 Solyc06g066340.3 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
Solyc10g078720.2.1 Solyc10g078720.2 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc12g098370.2.1 Solyc12g098370.2 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Zm00001d015407 GRMZM2G052544 No description available 0.04 Gene family
Zm00001d017702 GRMZM2G060834 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Zm00001d024532 GRMZM2G123308 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
Zm00001d028984 GRMZM2G009060 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d030911 GRMZM2G034563 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Zm00001d033310 GRMZM2G039074 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d046947 GRMZM2G081671 No description available 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!