Aliases : ATL6, LOC_Os12g24530
Description : no hits & (original description: none)
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00161170 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00152p00054630 | RHA2A,... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
AT2G34000 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G10910 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G61460 | BRH1 | brassinosteroid-responsive RING-H2 | 0.03 | OrthoFinder output from all 47 species | |
AT5G41430 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g118032 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Aev_g16138 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g39979 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g52164 | ATL8 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aob_g01623 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g00454 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g11831 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g26269 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0079.g038347 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g26664 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g32430 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g00774 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g08522 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g25638 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g41558 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g04460 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Len_g10964 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
MA_10429091g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_184439g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_6007471g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Pir_g18035 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g23741 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g17683 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g074790.3.1 | Solyc04g074790 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Tin_g12404 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e002233_P001 | Zm00001e002233 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007957_P001 | ATL6, Zm00001e007957 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010787_P001 | ATL3, Zm00001e010787 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e019779_P001 | Zm00001e019779 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034008_P001 | Zm00001e034008 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036691_P001 | Zm00001e036691 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 154 | 197 |
No external refs found! |