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  5. LOC_Os12g12720.1

LOC_Os12g12720.1 (LOC_Os12g12720)


Aliases : LOC_Os12g12720

Description : Salt stress-induced protein OS=Oryza sativa subsp. japonica (sp|q0jmy8|salt_orysj : 95.5)


Gene families : OG0001384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g12720.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT2G39310 JAL22 jacalin-related lectin 22 0.02 OrthoFinder output from all 47 species
AT3G16460 No alias Mannose-binding lectin superfamily protein 0.03 OrthoFinder output from all 47 species
Gb_17750 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_20108 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_24220 MBP1.2, F-ATMBP, MBP2 Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g25160.1 LOC_Os01g25160 Salt stress-induced protein OS=Oryza sativa subsp.... 0.09 OrthoFinder output from all 47 species
LOC_Os01g25280.1 LOC_Os01g25280 Salt stress-induced protein OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os03g28160.2 LOC_Os03g28160 Horcolin OS=Hordeum vulgare subsp. vulgare... 0.06 OrthoFinder output from all 47 species
LOC_Os06g12180.1 LOC_Os06g12180 Salt stress-induced protein OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e027607_P001 Zm00001e027607 Salt stress-induced protein OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e029546_P001 Zm00001e029546 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029551_P002 Zm00001e029551 Salt stress-induced protein OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 151 251
IPR004265 Dirigent 24 82
No external refs found!