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  5. LOC_Os12g11940.1

LOC_Os12g11940.1 (RLP28, AtRLP28, LOC_Os12g11940)


Aliases : RLP28, AtRLP28, LOC_Os12g11940

Description : no description available(sp|q9srl2|rlp34_arath : 206.0)


Gene families : OG0006840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006840_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g11940.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00234330 RLP53, AtRLP53,... Receptor-like protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030338001 AtRLP54, RLP54 Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.05 OrthoFinder output from all 47 species
GSVIVT01030340001 AtRLP54, RLP54 Receptor-like protein 19 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01030341001 AtRLP6, RLP6 Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.06 OrthoFinder output from all 47 species
GSVIVT01030345001 AtRLP6, RLP6 Receptor-like protein 6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01030353001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.04 OrthoFinder output from all 47 species
LOC_Os01g06760.1 RLP26, AtRLP26,... no description available(sp|q9ljw7|rlp43_arath : 284.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g06790.1 AtRLP6, RLP6,... Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.08 OrthoFinder output from all 47 species
LOC_Os01g06900.1 RLP24, AtRLP24,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g06920.1 AtRLP35, RLP35,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g07280.1 AtRLP35, RLP35,... no description available(sp|q9svm3|rlp49_arath : 362.0) 0.04 OrthoFinder output from all 47 species
LOC_Os12g10930.1 LOC_Os12g10930 Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.04 OrthoFinder output from all 47 species
LOC_Os12g11680.1 RLP24, AtRLP24,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g11720.1 AtRLP6, RLP6,... Receptor-like protein 19 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g12010.1 AtRLP6, RLP6,... no description available(sp|q9s9u3|rlp53_arath : 307.0) 0.05 OrthoFinder output from all 47 species
Solyc09g005080.1.1 RLP24, AtRLP24,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g005090.1.1 RLP7, AtRLP7,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 36 79
IPR001611 Leu-rich_rpt 649 668
IPR001611 Leu-rich_rpt 790 849
No external refs found!