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  5. LOC_Os12g09280.1

LOC_Os12g09280.1 (ATRPC14, RPC14,...)


Aliases : ATRPC14, RPC14, ATRPAC14, LOC_Os12g09280

Description : subunit 11 of RNA polymerase


Gene families : OG0005412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005412_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g09280.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g011491 ATRPC14, RPC14, ATRPAC14 component *(NRPC11) of RNA polymerase III complex &... 0.03 OrthoFinder output from all 47 species
Cba_g53572 No alias component *(NRPC11) of RNA polymerase III complex &... 0.03 OrthoFinder output from all 47 species
Mp8g01330.1 ATRPC14, RPC14, ATRPAC14 subunit 11 of RNA polymerase 0.04 OrthoFinder output from all 47 species
Ore_g38518 ATRPC14, RPC14, ATRPAC14 component *(NRPC11) of RNA polymerase III complex &... 0.03 OrthoFinder output from all 47 species
Solyc11g012195.1.1 ATRPC14, RPC14,... subunit 11 of RNA polymerase 0.06 OrthoFinder output from all 47 species
Spa_g20618 ATRPC14, RPC14, ATRPAC14 component *(NRPC11) of RNA polymerase III complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e021398_P001 ATRPC14, RPC14,... subunit 11 of RNA polymerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009025 RBP11-like_dimer 12 82
No external refs found!