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  5. LOC_Os12g07874.1

LOC_Os12g07874.1 (LOC_Os12g07874)


Aliases : LOC_Os12g07874

Description : COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana (sp|q9sy00|wdr5b_arath : 94.7)


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g07874.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268480 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.03 OrthoFinder output from all 47 species
AMTR_s00175p00024710 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.09 OrthoFinder output from all 47 species
AT5G42010 No alias Transducin/WD40 repeat-like superfamily protein 0.01 OrthoFinder output from all 47 species
Aop_g05042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10987 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g06072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45482 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g31480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015955 No alias not classified & original description: CDS=1-2550 0.03 OrthoFinder output from all 47 species
Smo427312 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc10g086430.3.1 Solyc10g086430 COMPASS-like H3K4 histone methylase component WDR5B... 0.04 OrthoFinder output from all 47 species
Zm00001e000107_P001 Zm00001e000107 COMPASS-like H3K4 histone methylase component WDR5A... 0.03 OrthoFinder output from all 47 species
Zm00001e014768_P003 Zm00001e014768 COMPASS-like H3K4 histone methylase component WDR5A... 0.03 OrthoFinder output from all 47 species
Zm00001e039506_P002 Zm00001e039506 COMPASS-like H3K4 histone methylase component WDR5B... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 199 228
IPR001680 WD40_repeat 305 338
IPR001680 WD40_repeat 344 380
No external refs found!