LOC_Os12g07490.1 (LOC_Os12g07490)


Aliases : LOC_Os12g07490

Description : subunit beta of co-translational insertion system Sec61 subcomplex


Gene families : OG0003689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003689_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g07490.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00194520 evm_27.TU.AmTr_v1... Protein translocation.endoplasmic... 0.04 OrthoFinder output from all 47 species
AT2G45070 SEC61 BETA Preprotein translocase Sec, Sec61-beta subunit protein 0.05 OrthoFinder output from all 47 species
Gb_11393 No alias subunit beta of co-translational insertion system Sec61... 0.07 OrthoFinder output from all 47 species
Gb_13283 No alias subunit beta of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
MA_140884g0010 No alias subunit beta of co-translational insertion system Sec61... 0.04 OrthoFinder output from all 47 species
Mp3g20910.1 No alias subunit beta of co-translational insertion system Sec61... 0.16 OrthoFinder output from all 47 species
Pp3c19_6510V3.1 Pp3c19_6510 Preprotein translocase Sec, Sec61-beta subunit protein 0.06 OrthoFinder output from all 47 species
Zm00001e029606_P001 Zm00001e029606 subunit beta of co-translational insertion system Sec61... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR016482 SecG/Sec61-beta/Sbh 37 75
No external refs found!