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  5. LOC_Os12g06480.2

LOC_Os12g06480.2 (LOC_Os12g06480)


Aliases : LOC_Os12g06480

Description : no hits & (original description: none)


Gene families : OG0001249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g06480.2
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT3G02890 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g11357 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14039.t1 Aspi01Gene14039 regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Ceric.07G012300.1 Ceric.07G012300 not classified & original description: pacid=50627728... 0.03 OrthoFinder output from all 47 species
Dcu_g17316 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Dde_g04018 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Msp_g25774 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Pnu_g24121 No alias component *(MED19) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ppi_g32877 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Sam_g44776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!