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  5. LOC_Os12g05930.1

LOC_Os12g05930.1 (LOC_Os12g05930)


Aliases : LOC_Os12g05930

Description : no hits & (original description: none)


Gene families : OG0000133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05930.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00255490 evm_27.TU.AmTr_v1... Receptor-like protein kinase OS=Ipomoea nil 0.03 OrthoFinder output from all 47 species
Aev_g38726 ATPSKR1, PSKR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42859 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g48147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G018200.1 Ceric.26G018200 not classified & original description: pacid=50599018... 0.02 OrthoFinder output from all 47 species
Dac_g31642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01894 RLP53, AtRLP53 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_04974 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.06 OrthoFinder output from all 47 species
Gb_20859 AtRLP22, RLP22 Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Gb_22857 RLP48, AtRLP48 Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Gb_34850 RLP26, AtRLP26 Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Gb_34855 RLP41, AtRLP41 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.06 OrthoFinder output from all 47 species
LOC_Os11g35410.1 RLP53, AtRLP53,... Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
LOC_Os11g35660.1 LOC_Os11g35660 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.07 OrthoFinder output from all 47 species
LOC_Os11g35850.1 AtRLP39, RLP39,... Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Lfl_g22538 RLP14, AtRLP14 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g26176 No alias PNP peptide receptor *(PNP-R) & original description: none 0.02 OrthoFinder output from all 47 species
MA_1019946g0010 ER, QRP1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10433791g0010 AtRLP12, RLP12 LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
MA_10434564g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10436682g0010 No alias LRR receptor-like serine/threonine-protein kinase EFR... 0.02 OrthoFinder output from all 47 species
MA_1045562g0010 ER, QRP1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_1047532g0010 ER, QRP1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_110603g0010 AtRLP6, RLP6 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
MA_124133g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_256555g0010 FLS2 Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
MA_262985g0010 No alias Receptor-like protein 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_4617178g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_723275g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_84450g0010 FLS2 CIF-peptide receptor (GSO) 0.04 OrthoFinder output from all 47 species
MA_9654294g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_9854158g0010 No alias no description available(sp|q9srl7|rlp35_arath : 111.0) 0.02 OrthoFinder output from all 47 species
Mp1g23650.1 NIK3 LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
Mp4g03660.1 GSO2, EDA23 LRR receptor-like serine/threonine-protein kinase GSO1... 0.05 OrthoFinder output from all 47 species
Mp4g16490.1 AtRLP54, RLP54 LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 OrthoFinder output from all 47 species
Mp4g21430.1 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.02 OrthoFinder output from all 47 species
Mp5g13350.1 RLP32, AtRLP32 Probably inactive leucine-rich repeat receptor-like... 0.03 OrthoFinder output from all 47 species
Msp_g36720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022817 No alias not classified & original description: CDS=1-1239 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024293 No alias not classified & original description: CDS=1-624 0.02 OrthoFinder output from all 47 species
Solyc12g013730.3.1 AtRLP6, RLP6,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g27739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010148_P001 Zm00001e010148 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011225_P001 Zm00001e011225 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Zm00001e020856_P001 Zm00001e020856 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Zm00001e022978_P001 Zm00001e022978 LRR receptor-like serine/threonine-protein kinase EFR... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 3 65
IPR001611 Leu-rich_rpt 135 155
No external refs found!